BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D05SP1|AL428714
(842 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1523 439 e-123
>3x_Contig1523
Length = 10049
Score = 439 bits (202), Expect = e-123
Identities = 254/294 (86%), Gaps = 1/294 (0%)
Strand = Plus / Minus
Query: 1 gatcttgttacccakagcatcgaacttgtckkcktcakckkcckkcktkkcgaktcttgg 60
|||||||||||||| ||||||||||||||| | ||| | || | | ||| ||||||
Sbjct: 293 gatcttgttacccatagcatcgaacttgtcttcttcatcttccttcttttcgattcttgg 234
Query: 61 accggaaccktgaccggkaacccagtgatgaccagakggagkgaktckaccakccktgac 120
||||||||| ||||||| |||||||| ||||||||| |||| | || |||| || ||||
Sbjct: 233 accggaaccttgaccggtaacccagttatgaccagatggagtcattctaccatccttgac 174
Query: 121 agcccagacttcttcagtcaaattcttggkgaattcagcagagkgagkgakgakgakaac 180
||||||||||||||||||||||||||||| ||||||||||||| ||| | || || |||
Sbjct: 173 agcccagacttcttcagtcaaattcttggtgaattcagcagagtgagtaatgatgataac 114
Query: 181 accaccttcgaaagcsttcaaagccttggacaaagcacctagagagtstctgtscaaata 240
||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 113 accaccttcgaaagccttcaaagccttggacaaagcacctagagagtctctgtccaaata 54
Query: 241 gttggkaggkkcatccaagasgatcaagtggggtctttgcsaggkacaagcagc 294
||||| ||| ||||||||| |||||||| |||||||||| ||| |||||||||
Sbjct: 53 gttggtaggttcatccaagacgatcaagt-gggtctttgccaggtacaagcagc 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.51 0.731 1.42
Gapped
Lambda K H
1.51 0.731 1.42
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2184
Number of Sequences: 1807
Number of extensions: 2184
Number of successful extensions: 167
Number of sequences better than 1.0e-20: 1
length of query: 842
length of database: 10,358,551
effective HSP length: 15
effective length of query: 827
effective length of database: 10,331,446
effective search space: 8544105842
effective search space used: 8544105842
T: 0
A: 40
X1: 5 (10.9 bits)
X2: 13 (28.3 bits)
S1: 11 (24.4 bits)
S2: 46 (100.5 bits)